PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000319941
Common NameTCP8
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family TCP
Protein Properties Length: 402aa    MW: 42981.3 Da    PI: 7.3699
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000319941genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.47.1e-40641802112
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 
                    ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++  + s +ss+s+ s++        
  MDP0000319941  64 PAKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSSMSAPshylrtna 159
                    689******************************************************************999867777777774444455565333 PP

            TCP  89 ............kaaksaakskksqksaasalnlak 112
                                +               as+++l  
  MDP0000319941 160 snyyfnsnnfgaA---------------ASTSQLVT 180
                    3333333333330...............33333333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.0E-4168254IPR005333Transcription factor, TCP
PROSITE profilePS5136927.21870124IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MIMEADNGIR CRPNFPLQFI DKTNQVDDDP EPAAACSTVA DPGSDLXRTG SSIQEQQPSN  60
KKPPAKRTST KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPS  120
VIAATGTGTI PANFTSLNIS LRSSGSSMSA PSHYLRTNAS NYYFNSNNFG AAASTSQLVT  180
EENAQRGRIL FPGAGLMSSE NSPPSSMLWN FNHSGNNNVS NNAMLEAKQE LGDHHQAVTL  240
DEASSMARKR IRPEQDLLSA STGPIPASQN TTPATFWMVA NNNPSSSQGS IHHEHTNSIN  300
PMWTIPTIGN AGNMHRGPVA GGSHGLHFMN FASPMAILPG QQLGLGSSTT SHGAADSHLG  360
VLAALNAYRP ILGGVAMEST ANGQHHPHHG ADEGHDRNTN AR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.113320.0bud| flower| fruit
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008339914.10.0PREDICTED: transcription factor TCP15-like
SwissprotQ93Z005e-57TCP14_ARATH; Transcription factor TCP14
TrEMBLD9ZJD60.0D9ZJD6_MALDO; TCP domain class transcription factor
STRINGGLYMA02G11781.13e-97(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.12e-48TCP family protein